Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav7n-4A0A075B620 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Gm11950-201ENSMUST00000121615 838 ntBASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7n-4A0A075B620 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Gm15165-201ENSMUST00000118140 502 ntBASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Gm7506-201ENSMUST00000207758 815 ntBASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7n-4A0A075B620 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Trav7n-4A0A075B620 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms