Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mrpl40Q9Z2Q5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm2810-201ENSMUST00000118681 990 ntBASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm18737-201ENSMUST00000173594 937 ntBASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mrpl40Q9Z2Q5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Mrpl40Q9Z2Q5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mrpl40Q9Z2Q5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mrpl40Q9Z2Q5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Mrpl40Q9Z2Q5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mrpl40Q9Z2Q5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm8410-201ENSMUST00000117225 605 ntBASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm9824-201ENSMUST00000178707 561 ntBASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mrpl40Q9Z2Q5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms