Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcb1Q9Z0H3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcb1Q9Z0H3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Gm5186-201ENSMUST00000218781 920 ntBASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcb1Q9Z0H3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcb1Q9Z0H3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms