Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 AA543401-201ENSMUST00000164248 1269 ntBASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gm6916-202ENSMUST00000205523 195 ntBASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gm6888-201ENSMUST00000221983 706 ntBASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upk3aQ9JKX8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm8584-201ENSMUST00000171982 758 ntBASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm27680-201ENSMUST00000184192 160 ntBASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Upk3aQ9JKX8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gm15920-201ENSMUST00000118998 402 ntBASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gm17837-201ENSMUST00000186435 985 ntBASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Upk3aQ9JKX8 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms