Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm29310-201ENSMUST00000185468 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21825-201ENSMUST00000185728 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm29109-201ENSMUST00000185895 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21896-201ENSMUST00000186520 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21873-201ENSMUST00000186728 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21794-201ENSMUST00000187056 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21880-201ENSMUST00000187275 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21826-201ENSMUST00000187451 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21198-201ENSMUST00000188393 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21749-201ENSMUST00000189343 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21901-201ENSMUST00000189568 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm29424-201ENSMUST00000189716 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm28599-201ENSMUST00000189838 694 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21867-201ENSMUST00000189917 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm29269-201ENSMUST00000190087 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21722-201ENSMUST00000190153 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm28423-201ENSMUST00000190701 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21899-201ENSMUST00000190745 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21910-201ENSMUST00000191163 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21849-201ENSMUST00000191571 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm28678-201ENSMUST00000191593 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm20910-201ENSMUST00000193268 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm21871-201ENSMUST00000194621 696 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm44344-201ENSMUST00000200287 129 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm9182-201ENSMUST00000217829 639 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Shd-206ENSMUST00000225145 998 ntBASIC16.13■□□□□ 0.17
Smco2Q9DA21 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco2Q9DA21 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gm7775-201ENSMUST00000218871 853 ntBASIC16.12■□□□□ 0.17
Smco2Q9DA21 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smco2Q9DA21 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco2Q9DA21 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms