Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem88Q9D0N8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tmem88Q9D0N8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Tmem88Q9D0N8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Tmem88Q9D0N8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Tmem88Q9D0N8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tmem88Q9D0N8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tmem88Q9D0N8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Tmem88Q9D0N8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Gm44450-201ENSMUST00000199528 114 ntBASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Gm18421-201ENSMUST00000204122 625 ntBASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.33□□□□□ -0.6
Tmem88Q9D0N8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tmem88Q9D0N8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Gm9013-201ENSMUST00000132939 882 ntBASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Tmem88Q9D0N8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms