Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Ssr1Q9CY50 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Gm12350-201ENSMUST00000121208 462 ntBASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ssr1Q9CY50 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.53■□□□□ 0.08
Ssr1Q9CY50 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ssr1Q9CY50 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms