Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.56□□□□□ -0.4
Pfdn1Q9CWM4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn1Q9CWM4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn1Q9CWM4 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms