Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Gm10499-201ENSMUST00000174094 934 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Gm44454-201ENSMUST00000198541 138 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RTRAFQ9CQE8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RTRAFQ9CQE8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms