Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Nipsnap3bQ9CQE1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm9385-201ENSMUST00000117563 472 ntBASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm27301-201ENSMUST00000184012 127 ntBASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nipsnap3bQ9CQE1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm9182-201ENSMUST00000217829 639 ntBASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.1□□□□□ -0.15
Nipsnap3bQ9CQE1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms