Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scrt1Q99M85 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.56□□□□□ -0.4
Scrt1Q99M85 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.56□□□□□ -0.4
Scrt1Q99M85 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.56□□□□□ -0.4
Scrt1Q99M85 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.55□□□□□ -0.4
Scrt1Q99M85 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Gm9899-201ENSMUST00000065519 555 ntBASIC12.55□□□□□ -0.4
Scrt1Q99M85 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scrt1Q99M85 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm9522-201ENSMUST00000182394 926 ntBASIC12.54□□□□□ -0.4
Scrt1Q99M85 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.54□□□□□ -0.4
Scrt1Q99M85 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scrt1Q99M85 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms