Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm17420-201ENSMUST00000164753 153 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm27847-201ENSMUST00000183711 107 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm27375-201ENSMUST00000183799 107 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm29127-201ENSMUST00000188304 517 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm18027-201ENSMUST00000218947 619 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gm6091-201ENSMUST00000098307 165 ntBASIC15.01□□□□□ -0.01
Clp1Q99LI9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Clp1Q99LI9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Clp1Q99LI9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Clp1Q99LI9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Clp1Q99LI9 Gm15376-201ENSMUST00000122258 783 ntBASIC15□□□□□ -0.01
Clp1Q99LI9 Gm27731-201ENSMUST00000185192 107 ntBASIC15□□□□□ -0.01
Clp1Q99LI9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Clp1Q99LI9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Clp1Q99LI9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Clp1Q99LI9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Clp1Q99LI9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clp1Q99LI9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Gm10012-201ENSMUST00000078252 192 ntBASIC14.99□□□□□ -0.01
Clp1Q99LI9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.99□□□□□ -0.01
Clp1Q99LI9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clp1Q99LI9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Mir1247-201ENSMUST00000116706 82 ntBASIC14.98□□□□□ -0.01
Clp1Q99LI9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.98□□□□□ -0.01
Clp1Q99LI9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.98□□□□□ -0.01
Clp1Q99LI9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Clp1Q99LI9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clp1Q99LI9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.98□□□□□ -0.01
Clp1Q99LI9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms