Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb5Q91XZ5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Gm9002-201ENSMUST00000178437 499 ntBASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb5Q91XZ5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Gm27701-201ENSMUST00000184498 110 ntBASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb5Q91XZ5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gm28911-201ENSMUST00000188837 117 ntBASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gm37714-201ENSMUST00000194742 342 ntBASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb5Q91XZ5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Mir7654-201ENSMUST00000185082 70 ntBASIC16.77■□□□□ 0.28
Pcdhb5Q91XZ5 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms