Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Pcdhb6Q91XZ4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Pcdhb6Q91XZ4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb6Q91XZ4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb6Q91XZ4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Pcdhb6Q91XZ4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Gm6222-201ENSMUST00000120787 396 ntBASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Gm18766-201ENSMUST00000189811 808 ntBASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb6Q91XZ4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm44608-201ENSMUST00000206827 855 ntBASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb6Q91XZ4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm5566-201ENSMUST00000116118 459 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm27631-201ENSMUST00000184163 466 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm27702-201ENSMUST00000184512 56 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 AA619741-201ENSMUST00000195095 646 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb6Q91XZ4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms