Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga4Q91XY4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Gm27920-201ENSMUST00000183953 96 ntBASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Gm7774-201ENSMUST00000200064 533 ntBASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga4Q91XY4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Mir449b-201ENSMUST00000104833 80 ntBASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga4Q91XY4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga4Q91XY4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms