Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slf1Q8R3P9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slf1Q8R3P9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slf1Q8R3P9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slf1Q8R3P9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slf1Q8R3P9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.49□□□□□ -0.09
Slf1Q8R3P9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slf1Q8R3P9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slf1Q8R3P9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Gm18041-201ENSMUST00000218210 618 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slf1Q8R3P9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms