Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col23a1Q8K4G2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Gm2991-201ENSMUST00000173338 480 ntBASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Gm6082-201ENSMUST00000215204 454 ntBASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col23a1Q8K4G2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Gm6621-201ENSMUST00000193251 772 ntBASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Gm5363-201ENSMUST00000211927 938 ntBASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Itm2b-204ENSMUST00000228637 783 ntBASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col23a1Q8K4G2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm38158-201ENSMUST00000194617 339 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm43138-201ENSMUST00000199123 708 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm24447-201ENSMUST00000083977 338 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.12■□□□□ 0.33
Col23a1Q8K4G2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm15370-201ENSMUST00000117158 253 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm14381-201ENSMUST00000122105 414 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms