Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC9□□□□□ -0.97
Cystm1Q8K353 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm4535-201ENSMUST00000182274 558 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm10060-201ENSMUST00000212002 111 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 AC160338.1-201ENSMUST00000214232 705 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm6296-201ENSMUST00000222599 943 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 Cmtm5-203ENSMUST00000227441 610 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 AC154757.1-201ENSMUST00000228289 336 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9□□□□□ -0.97
Cystm1Q8K353 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm10355-201ENSMUST00000097146 517 ntBASIC9□□□□□ -0.97
Cystm1Q8K353 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Cystm1Q8K353 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Cystm1Q8K353 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9□□□□□ -0.97
Cystm1Q8K353 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cystm1Q8K353 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm9889-202ENSMUST00000206983 1577 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm9279-201ENSMUST00000223175 1606 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Ssr1-203ENSMUST00000225246 1825 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm11452-201ENSMUST00000122376 690 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm25406-201ENSMUST00000157599 105 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Mir6404-201ENSMUST00000183699 94 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm2651-201ENSMUST00000203560 838 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 AC154262.2-201ENSMUST00000224310 2293 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 AC164426.2-201ENSMUST00000225993 2492 ntBASIC8.99□□□□□ -0.97
Cystm1Q8K353 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms