Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rftn2Q8CHX7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gm28760-201ENSMUST00000185995 736 ntBASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gm42612-201ENSMUST00000197986 623 ntBASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gm43170-201ENSMUST00000199827 612 ntBASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rftn2Q8CHX7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.02
Rftn2Q8CHX7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.14■□□□□ 0.01
Rftn2Q8CHX7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Gm28631-201ENSMUST00000190740 334 ntBASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rftn2Q8CHX7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms