Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rd3Q8BRE0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm18624-201ENSMUST00000220966 658 ntBASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rd3Q8BRE0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Gm11918-201ENSMUST00000121660 179 ntBASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rd3Q8BRE0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms