Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Mir5126-201ENSMUST00000175513 77 ntBASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdhr3Q8BL00 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Acot6-202ENSMUST00000222921 3622 ntBASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Thap2-203ENSMUST00000218989 527 ntBASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdhr3Q8BL00 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm5177-201ENSMUST00000183092 997 ntBASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm28659-201ENSMUST00000188013 759 ntBASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdhr3Q8BL00 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms