Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcd3Q6P9Z1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcd3Q6P9Z1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcd3Q6P9Z1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.15□□□□□ -0.31
Smarcd3Q6P9Z1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcd3Q6P9Z1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm16026-204ENSMUST00000162652 683 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Mir5126-201ENSMUST00000175513 77 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm18195-201ENSMUST00000207604 706 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Mzt1-203ENSMUST00000227948 952 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm10154-201ENSMUST00000084445 354 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcd3Q6P9Z1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcd3Q6P9Z1 Mir5131-201ENSMUST00000175426 93 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms