Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.75□□□□□ -0.21
ClpbQ60649 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
ClpbQ60649 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.75□□□□□ -0.21
ClpbQ60649 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ClpbQ60649 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ClpbQ60649 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Mir449b-201ENSMUST00000104833 80 ntBASIC13.75□□□□□ -0.21
ClpbQ60649 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.75□□□□□ -0.21
ClpbQ60649 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.75□□□□□ -0.21
ClpbQ60649 Gm27920-201ENSMUST00000183953 96 ntBASIC13.75□□□□□ -0.21
ClpbQ60649 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.75□□□□□ -0.21
ClpbQ60649 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ClpbQ60649 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ClpbQ60649 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.75□□□□□ -0.21
ClpbQ60649 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.74□□□□□ -0.21
ClpbQ60649 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.74□□□□□ -0.21
ClpbQ60649 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.74□□□□□ -0.21
ClpbQ60649 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.74□□□□□ -0.21
ClpbQ60649 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.74□□□□□ -0.21
ClpbQ60649 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ClpbQ60649 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.74□□□□□ -0.21
ClpbQ60649 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.74□□□□□ -0.21
ClpbQ60649 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ClpbQ60649 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ClpbQ60649 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.74□□□□□ -0.21
ClpbQ60649 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ClpbQ60649 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ClpbQ60649 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ClpbQ60649 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms