Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gm2213-201ENSMUST00000197485 688 ntBASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf20Q5DTM8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Gm24513-201ENSMUST00000174964 138 ntBASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Gm27397-201ENSMUST00000184997 107 ntBASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf20Q5DTM8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf20Q5DTM8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf20Q5DTM8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Gm25287-201ENSMUST00000103846 110 ntBASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Gm22918-201ENSMUST00000103855 110 ntBASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Gm12882-201ENSMUST00000121696 517 ntBASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Mir6990-201ENSMUST00000183724 91 ntBASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms