Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps45P97390 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps45P97390 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps45P97390 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps45P97390 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps45P97390 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps45P97390 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.8□□□□□ -0.04
Vps45P97390 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Gm38225-201ENSMUST00000194001 393 ntBASIC14.8□□□□□ -0.04
Vps45P97390 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Gm7730-201ENSMUST00000212486 454 ntBASIC14.8□□□□□ -0.04
Vps45P97390 Gm6888-201ENSMUST00000221983 706 ntBASIC14.8□□□□□ -0.04
Vps45P97390 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps45P97390 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.8□□□□□ -0.04
Vps45P97390 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Vps45P97390 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.8□□□□□ -0.04
Vps45P97390 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps45P97390 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps45P97390 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps45P97390 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps45P97390 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Vps45P97390 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Gm14042-201ENSMUST00000120139 833 ntBASIC14.79□□□□□ -0.04
Vps45P97390 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.79□□□□□ -0.04
Vps45P97390 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vps45P97390 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.79□□□□□ -0.04
Vps45P97390 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Vps45P97390 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps45P97390 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps45P97390 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps45P97390 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps45P97390 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps45P97390 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Gm7488-201ENSMUST00000117148 684 ntBASIC14.78□□□□□ -0.04
Vps45P97390 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Gm25144-201ENSMUST00000179561 110 ntBASIC14.78□□□□□ -0.04
Vps45P97390 Gm25352-201ENSMUST00000179815 110 ntBASIC14.78□□□□□ -0.04
Vps45P97390 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps45P97390 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps45P97390 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps45P97390 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms