Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ldb1P70662 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ldb1P70662 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ldb1P70662 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.26□□□□□ -0.13
Ldb1P70662 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ldb1P70662 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.26□□□□□ -0.13
Ldb1P70662 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.26□□□□□ -0.13
Ldb1P70662 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.26□□□□□ -0.13
Ldb1P70662 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ldb1P70662 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ldb1P70662 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ldb1P70662 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ldb1P70662 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.25□□□□□ -0.13
Ldb1P70662 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ldb1P70662 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Mir1895-201ENSMUST00000122615 79 ntBASIC14.25□□□□□ -0.13
Ldb1P70662 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.25□□□□□ -0.13
Ldb1P70662 Gm24513-201ENSMUST00000174964 138 ntBASIC14.25□□□□□ -0.13
Ldb1P70662 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.25□□□□□ -0.13
Ldb1P70662 Gm27397-201ENSMUST00000184997 107 ntBASIC14.25□□□□□ -0.13
Ldb1P70662 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ldb1P70662 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.25□□□□□ -0.13
Ldb1P70662 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ldb1P70662 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ldb1P70662 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.25□□□□□ -0.13
Ldb1P70662 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.24□□□□□ -0.13
Ldb1P70662 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ldb1P70662 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ldb1P70662 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.24□□□□□ -0.13
Ldb1P70662 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Gm38225-201ENSMUST00000194001 393 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Gm44335-201ENSMUST00000196879 141 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Gm44297-201ENSMUST00000198304 141 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Gm44346-201ENSMUST00000198851 141 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ldb1P70662 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.24□□□□□ -0.13
Ldb1P70662 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ldb1P70662 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms