Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.94□□□□□ -0.5
Pdlim4P70271 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pdlim4P70271 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdlim4P70271 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Gm43125-201ENSMUST00000201724 730 ntBASIC11.93□□□□□ -0.5
Pdlim4P70271 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.93□□□□□ -0.5
Pdlim4P70271 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdlim4P70271 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Pdlim4P70271 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Carlr-201ENSMUST00000181515 2574 ntBASIC11.92□□□□□ -0.5
Pdlim4P70271 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.92□□□□□ -0.5
Pdlim4P70271 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.92□□□□□ -0.5
Pdlim4P70271 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Pdlim4P70271 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.92□□□□□ -0.5
Pdlim4P70271 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdlim4P70271 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms