Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Gm25911-201ENSMUST00000157621 56 ntBASIC14.62□□□□□ -0.07
Tubgcp3P58854 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.62□□□□□ -0.07
Tubgcp3P58854 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.62□□□□□ -0.07
Tubgcp3P58854 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubgcp3P58854 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.61□□□□□ -0.07
Tubgcp3P58854 Gm18057-201ENSMUST00000208220 503 ntBASIC14.61□□□□□ -0.07
Tubgcp3P58854 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.61□□□□□ -0.07
Tubgcp3P58854 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.61□□□□□ -0.07
Tubgcp3P58854 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubgcp3P58854 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Gm4995-201ENSMUST00000117247 432 ntBASIC14.6□□□□□ -0.07
Tubgcp3P58854 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubgcp3P58854 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.59□□□□□ -0.07
Tubgcp3P58854 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubgcp3P58854 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms