Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CckbrP56481 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Gm14701-201ENSMUST00000117156 348 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Gm23547-201ENSMUST00000158210 271 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Gm7774-201ENSMUST00000200064 533 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Gm5867-201ENSMUST00000063197 592 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CckbrP56481 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CckbrP56481 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.28□□□□□ -0.28
CckbrP56481 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CckbrP56481 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CckbrP56481 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.27□□□□□ -0.28
CckbrP56481 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.27□□□□□ -0.28
CckbrP56481 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CckbrP56481 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.27□□□□□ -0.29
CckbrP56481 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Mir449b-201ENSMUST00000104833 80 ntBASIC13.27□□□□□ -0.29
CckbrP56481 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.27□□□□□ -0.29
CckbrP56481 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.27□□□□□ -0.29
CckbrP56481 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CckbrP56481 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.27□□□□□ -0.29
CckbrP56481 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
CckbrP56481 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CckbrP56481 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Gm13015-201ENSMUST00000118674 204 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CckbrP56481 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.26□□□□□ -0.29
CckbrP56481 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CckbrP56481 Gm29310-201ENSMUST00000185468 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21825-201ENSMUST00000185728 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm29109-201ENSMUST00000185895 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21896-201ENSMUST00000186520 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21873-201ENSMUST00000186728 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21794-201ENSMUST00000187056 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21880-201ENSMUST00000187275 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21826-201ENSMUST00000187451 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21198-201ENSMUST00000188393 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21749-201ENSMUST00000189343 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21901-201ENSMUST00000189568 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm29424-201ENSMUST00000189716 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm28599-201ENSMUST00000189838 694 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21867-201ENSMUST00000189917 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm29269-201ENSMUST00000190087 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21722-201ENSMUST00000190153 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm28423-201ENSMUST00000190701 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21899-201ENSMUST00000190745 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21910-201ENSMUST00000191163 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21849-201ENSMUST00000191571 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm28678-201ENSMUST00000191593 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm20910-201ENSMUST00000193268 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Gm21871-201ENSMUST00000194621 696 ntBASIC13.26□□□□□ -0.29
CckbrP56481 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CckbrP56481 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms