Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.55□□□□□ -0.4
GdnfP48540 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.55□□□□□ -0.4
GdnfP48540 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GdnfP48540 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.54□□□□□ -0.4
GdnfP48540 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
GdnfP48540 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.54□□□□□ -0.4
GdnfP48540 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.54□□□□□ -0.4
GdnfP48540 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.54□□□□□ -0.4
GdnfP48540 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
GdnfP48540 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.54□□□□□ -0.4
GdnfP48540 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.54□□□□□ -0.4
GdnfP48540 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GdnfP48540 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
GdnfP48540 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GdnfP48540 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.53□□□□□ -0.4
GdnfP48540 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Gm13597-201ENSMUST00000121239 375 ntBASIC12.53□□□□□ -0.4
GdnfP48540 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.53□□□□□ -0.4
GdnfP48540 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GdnfP48540 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.53□□□□□ -0.4
GdnfP48540 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GdnfP48540 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.53□□□□□ -0.4
GdnfP48540 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GdnfP48540 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GdnfP48540 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.53□□□□□ -0.4
GdnfP48540 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
GdnfP48540 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GdnfP48540 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms