Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Gm13350-201ENSMUST00000120519 479 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 Gm13385-201ENSMUST00000121089 220 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Gm4857-201ENSMUST00000192718 785 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 Gm19184-201ENSMUST00000196798 928 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.22□□□□□ -0.13
PdgfbP31240 Gm19309-201ENSMUST00000218295 205 ntBASIC14.22□□□□□ -0.13
PdgfbP31240 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfbP31240 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfbP31240 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
PdgfbP31240 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PdgfbP31240 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.21□□□□□ -0.13
PdgfbP31240 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Mir3547-201ENSMUST00000175461 88 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Gm18027-201ENSMUST00000218947 619 ntBASIC14.21□□□□□ -0.13
PdgfbP31240 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfbP31240 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PdgfbP31240 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfbP31240 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfbP31240 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfbP31240 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfbP31240 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfbP31240 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.2□□□□□ -0.14
PdgfbP31240 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PdgfbP31240 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PdgfbP31240 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PdgfbP31240 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PdgfbP31240 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PdgfbP31240 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.2□□□□□ -0.14
PdgfbP31240 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.2□□□□□ -0.14
PdgfbP31240 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PdgfbP31240 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.2□□□□□ -0.14
PdgfbP31240 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfbP31240 Gm8810-201ENSMUST00000172895 754 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms