Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.23□□□□□ -0.13
Nckap1P28660 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Nckap1P28660 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nckap1P28660 Gm15393-201ENSMUST00000120499 219 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.23□□□□□ -0.13
Nckap1P28660 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.23□□□□□ -0.13
Nckap1P28660 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nckap1P28660 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 BC001981-202ENSMUST00000191393 1545 ntBASIC14.23□□□□□ -0.13
Nckap1P28660 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nckap1P28660 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nckap1P28660 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nckap1P28660 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.23□□□□□ -0.13
Nckap1P28660 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nckap1P28660 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nckap1P28660 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.22□□□□□ -0.13
Nckap1P28660 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.22□□□□□ -0.13
Nckap1P28660 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Gm12585-201ENSMUST00000117307 290 ntBASIC14.22□□□□□ -0.13
Nckap1P28660 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.22□□□□□ -0.13
Nckap1P28660 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nckap1P28660 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nckap1P28660 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Nckap1P28660 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nckap1P28660 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nckap1P28660 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nckap1P28660 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nckap1P28660 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nckap1P28660 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Nckap1P28660 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Gm9794-201ENSMUST00000202370 423 ntBASIC14.21□□□□□ -0.13
Nckap1P28660 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.21□□□□□ -0.13
Nckap1P28660 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nckap1P28660 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.21□□□□□ -0.13
Nckap1P28660 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nckap1P28660 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nckap1P28660 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms