Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.46□□□□□ -0.74
TcraP01849 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.46□□□□□ -0.74
TcraP01849 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.46□□□□□ -0.74
TcraP01849 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.46□□□□□ -0.74
TcraP01849 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.46□□□□□ -0.74
TcraP01849 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
TcraP01849 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.45□□□□□ -0.74
TcraP01849 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.45□□□□□ -0.74
TcraP01849 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
TcraP01849 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Gm15165-201ENSMUST00000118140 502 ntBASIC10.45□□□□□ -0.74
TcraP01849 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.45□□□□□ -0.74
TcraP01849 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 Gm27704-201ENSMUST00000185094 107 ntBASIC10.45□□□□□ -0.74
TcraP01849 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.45□□□□□ -0.74
TcraP01849 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.45□□□□□ -0.74
TcraP01849 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TcraP01849 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.45□□□□□ -0.74
TcraP01849 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TcraP01849 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.44□□□□□ -0.74
TcraP01849 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
TcraP01849 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.44□□□□□ -0.74
TcraP01849 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.44□□□□□ -0.74
TcraP01849 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
TcraP01849 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
TcraP01849 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.44□□□□□ -0.74
TcraP01849 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.44□□□□□ -0.74
TcraP01849 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
TcraP01849 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.44□□□□□ -0.74
TcraP01849 Grk6-205ENSMUST00000224653 2976 ntBASIC10.44□□□□□ -0.74
TcraP01849 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TcraP01849 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.44□□□□□ -0.74
TcraP01849 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms