Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trdmt1O55055 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.68■□□□□ 0.1
Trdmt1O55055 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.68■□□□□ 0.1
Trdmt1O55055 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trdmt1O55055 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm27839-201ENSMUST00000184242 106 ntBASIC15.67■□□□□ 0.1
Trdmt1O55055 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trdmt1O55055 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.67■□□□□ 0.1
Trdmt1O55055 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.67■□□□□ 0.1
Trdmt1O55055 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.67■□□□□ 0.1
Trdmt1O55055 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trdmt1O55055 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm11524-201ENSMUST00000119349 807 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm13385-201ENSMUST00000121089 220 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm8463-201ENSMUST00000208573 613 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.66■□□□□ 0.1
Trdmt1O55055 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.66■□□□□ 0.1
Trdmt1O55055 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms