Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Kcnu1O54982 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Kcnu1O54982 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.23■□□□□ 0.03
Kcnu1O54982 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gm8000-201ENSMUST00000188378 592 ntBASIC15.23■□□□□ 0.03
Kcnu1O54982 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.23■□□□□ 0.03
Kcnu1O54982 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Kcnu1O54982 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.23■□□□□ 0.03
Kcnu1O54982 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.22■□□□□ 0.03
Kcnu1O54982 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.22■□□□□ 0.03
Kcnu1O54982 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.22■□□□□ 0.03
Kcnu1O54982 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.22■□□□□ 0.03
Kcnu1O54982 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Kcnu1O54982 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Kcnu1O54982 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Kcnu1O54982 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Kcnu1O54982 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Kcnu1O54982 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.21■□□□□ 0.03
Kcnu1O54982 Gm13365-201ENSMUST00000121188 973 ntBASIC15.21■□□□□ 0.03
Kcnu1O54982 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Gm6443-201ENSMUST00000203599 874 ntBASIC15.21■□□□□ 0.03
Kcnu1O54982 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Kcnu1O54982 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Kcnu1O54982 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms