Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Efnb3O35393 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Efnb3O35393 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.31□□□□□ -0.6
Efnb3O35393 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Efnb3O35393 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Gm7230-201ENSMUST00000173026 815 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Efnb3O35393 Gm6089-201ENSMUST00000197666 938 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.31□□□□□ -0.6
Efnb3O35393 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Efnb3O35393 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Efnb3O35393 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.31□□□□□ -0.6
Efnb3O35393 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.31□□□□□ -0.6
Efnb3O35393 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.31□□□□□ -0.6
Efnb3O35393 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Efnb3O35393 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Efnb3O35393 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
Efnb3O35393 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.3□□□□□ -0.6
Efnb3O35393 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Efnb3O35393 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.3□□□□□ -0.6
Efnb3O35393 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Gm7222-201ENSMUST00000117512 906 ntBASIC11.3□□□□□ -0.6
Efnb3O35393 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Gm5682-201ENSMUST00000173402 505 ntBASIC11.3□□□□□ -0.6
Efnb3O35393 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.3□□□□□ -0.6
Efnb3O35393 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Efnb3O35393 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Efnb3O35393 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms