Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm29269-201ENSMUST00000190087 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21722-201ENSMUST00000190153 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm28423-201ENSMUST00000190701 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21899-201ENSMUST00000190745 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21910-201ENSMUST00000191163 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21849-201ENSMUST00000191571 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm28678-201ENSMUST00000191593 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm20910-201ENSMUST00000193268 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Gm21871-201ENSMUST00000194621 696 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.88□□□□□ -0.03
Ebf3O08791 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.88□□□□□ -0.03
Ebf3O08791 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf3O08791 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf3O08791 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ebf3O08791 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ebf3O08791 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf3O08791 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ebf3O08791 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ebf3O08791 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Gm4875-201ENSMUST00000118257 786 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Gm6222-201ENSMUST00000120787 396 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.87□□□□□ -0.03
Ebf3O08791 Gm9794-201ENSMUST00000202370 423 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Gm16476-201ENSMUST00000221544 139 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Dupd1-202ENSMUST00000224735 548 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.87□□□□□ -0.03
Ebf3O08791 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf3O08791 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf3O08791 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ebf3O08791 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Gm14928-201ENSMUST00000120198 477 ntBASIC14.86□□□□□ -0.03
Ebf3O08791 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.86□□□□□ -0.03
Ebf3O08791 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ebf3O08791 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.86□□□□□ -0.03
Ebf3O08791 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.86□□□□□ -0.03
Ebf3O08791 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ebf3O08791 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ebf3O08791 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Gm15653-201ENSMUST00000119247 907 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms