Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm5878E9PUB3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm5878E9PUB3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Gm5878E9PUB3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm5878E9PUB3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Psmb5-202ENSMUST00000227257 622 ntBASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm5878E9PUB3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm15483-201ENSMUST00000120338 456 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm11543-201ENSMUST00000120758 370 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm18737-201ENSMUST00000173594 937 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm18733-201ENSMUST00000173950 856 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Rpph1-201ENSMUST00000175096 319 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm27920-201ENSMUST00000183953 96 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm5878E9PUB3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm5878E9PUB3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms