Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Mir497b-201ENSMUST00000093601 125 ntBASIC14.93□□□□□ -0.02
Scn1aA2APX8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn1aA2APX8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm6912-201ENSMUST00000117218 544 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm12859-201ENSMUST00000117834 427 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm11424-201ENSMUST00000121929 829 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm28760-201ENSMUST00000185995 736 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm7653-201ENSMUST00000214567 508 ntBASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn1aA2APX8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.91□□□□□ -0.02
Scn1aA2APX8 Gm5279-201ENSMUST00000199575 745 ntBASIC14.91□□□□□ -0.02
Scn1aA2APX8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.91□□□□□ -0.02
Scn1aA2APX8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn1aA2APX8 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.9□□□□□ -0.02
Scn1aA2APX8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Gm12134-201ENSMUST00000122109 520 ntBASIC14.9□□□□□ -0.02
Scn1aA2APX8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn1aA2APX8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms