Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pck2-205ENSMUST00000226352 2784 ntBASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Grk6-205ENSMUST00000224653 2976 ntBASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3n-3A0A0G2JEM0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Olfr129-201ENSMUST00000122318 993 ntBASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms