Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm27920-201ENSMUST00000183953 96 ntBASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm11025-201ENSMUST00000140773 466 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm5479-201ENSMUST00000160578 435 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms