Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav5-4A0A075B652 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gm16026-204ENSMUST00000162652 683 ntBASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gm5177-201ENSMUST00000183092 997 ntBASIC12□□□□□ -0.49
Trav5-4A0A075B652 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav5-4A0A075B652 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav5-4A0A075B652 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav5-4A0A075B652 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms