Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.81□□□□□ -0.36
Cldn13Q9Z0S4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn13Q9Z0S4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm11543-201ENSMUST00000120758 370 ntBASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm5312-201ENSMUST00000203728 547 ntBASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn13Q9Z0S4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn13Q9Z0S4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms