Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Mir1897-201ENSMUST00000122581 272 ntBASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3aQ9JKX8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk3aQ9JKX8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk3aQ9JKX8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk3aQ9JKX8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk3aQ9JKX8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.77□□□□□ -0.21
Upk3aQ9JKX8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Mir6956-201ENSMUST00000183598 62 ntBASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3aQ9JKX8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms