Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.5□□□□□ -0.57
Smco4Q9JIS3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.49□□□□□ -0.57
Smco4Q9JIS3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Smco4Q9JIS3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smco4Q9JIS3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco4Q9JIS3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms