Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn3Q9ES97 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn3Q9ES97 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rtn3Q9ES97 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Gm18737-201ENSMUST00000173594 937 ntBASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn3Q9ES97 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rtn3Q9ES97 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rtn3Q9ES97 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Gm43125-201ENSMUST00000201724 730 ntBASIC15.25■□□□□ 0.03
Rtn3Q9ES97 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rtn3Q9ES97 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms