Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssu72Q9CY97 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssu72Q9CY97 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm15173-201ENSMUST00000122049 433 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm5479-201ENSMUST00000160578 435 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Rps4l-201ENSMUST00000071745 943 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ssu72Q9CY97 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.21□□□□□ -0.13
Ssu72Q9CY97 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms