Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm13689-201ENSMUST00000119360 685 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm6013-201ENSMUST00000212264 699 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.57□□□□□ -0.08
Cldnd1Q9CQX5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm23931-201ENSMUST00000103842 109 ntBASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm24644-201ENSMUST00000157114 139 ntBASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm43818-201ENSMUST00000200605 466 ntBASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gm18027-201ENSMUST00000218947 619 ntBASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cldnd1Q9CQX5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Gm24196-201ENSMUST00000179161 110 ntBASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Gm18827-201ENSMUST00000188341 790 ntBASIC14.55□□□□□ -0.08
Cldnd1Q9CQX5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms