Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm11543-201ENSMUST00000120758 370 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm25109-201ENSMUST00000122474 114 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm27430-201ENSMUST00000184585 107 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm29288-201ENSMUST00000191582 901 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm37973-201ENSMUST00000195767 1289 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm44333-201ENSMUST00000197168 107 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Gm42516-201ENSMUST00000198691 767 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 CT025525.1-201ENSMUST00000226325 1054 ntBASIC18.48■□□□□ 0.55
Rtn4Q99P72 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn4Q99P72 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm13740-201ENSMUST00000120590 310 ntBASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm15061-201ENSMUST00000121076 1046 ntBASIC18.47■□□□□ 0.55
Rtn4Q99P72 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm8190-201ENSMUST00000199603 586 ntBASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 AC154806.5-202ENSMUST00000227217 1443 ntBASIC18.47■□□□□ 0.55
Rtn4Q99P72 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn4Q99P72 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Gm42479-201ENSMUST00000198654 1356 ntBASIC18.46■□□□□ 0.55
Rtn4Q99P72 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Gm16026-204ENSMUST00000162652 683 ntBASIC18.46■□□□□ 0.55
Rtn4Q99P72 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.46■□□□□ 0.55
Rtn4Q99P72 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtn4Q99P72 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rtn4Q99P72 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rtn4Q99P72 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC18.45■□□□□ 0.54
Rtn4Q99P72 AC129597.1-201ENSMUST00000223046 1234 ntBASIC18.45■□□□□ 0.54
Rtn4Q99P72 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.45■□□□□ 0.54
Rtn4Q99P72 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rtn4Q99P72 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.45■□□□□ 0.54
Rtn4Q99P72 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms