Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm8584-201ENSMUST00000171982 758 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.1■□□□□ 0.17
Pcdhb15Q91Y04 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Gm10275-202ENSMUST00000168697 495 ntBASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Gm10275-201ENSMUST00000092620 635 ntBASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb15Q91Y04 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb15Q91Y04 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Gm18195-201ENSMUST00000207604 706 ntBASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb15Q91Y04 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb15Q91Y04 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms